PyVCI: A flexible open-source code for calculating accurate molecular infrared spectra

Type of content
Journal Article
Thesis discipline
Degree name
Publisher
University of Canterbury. Chemistry
Journal Title
Journal ISSN
Volume Title
Language
Date
2016
Authors
Sibaev, M.
Crittenden, D.L.
Abstract

The PyVCI program package is a general purpose open-source code for simulating accurate molecular spectra, based upon force field expansions of the potential energy surface in normal mode coordinates. It includes harmonic normal coordinate analysis and vibrational configuration interaction (VCI) algorithms, implemented primarily in Python for accessibility but with time-consuming routines written in C. Coriolis coupling terms may be optionally included in the vibrational Hamiltonian. Non-negligible VCI matrix elements are stored in sparse matrix format to alleviate the diagonalization problem. CPU and memory requirements may be further controlled by algorithmic choices and/or numerical screening procedures, and recommended values are established by benchmarking using a test set of 44 molecules for which accurate analytical potential energy surfaces are available. Force fields in normal mode coordinates are obtained from the PyPES library of high quality analytical potential energy surfaces (to 6th order) or by numerical differentiation of analytic second derivatives generated using the GAMESS quantum chemical program package (to 4th order).

Description
Citation
Sibaev, M., Crittenden, D.L. (2016) PyVCI: A flexible open-source code for calculating accurate molecular infrared spectra. Computer Physics Communications, (early access online).
Keywords
vibrational configuration interaction, Coriolis coupling, infrared spectroscopy, normal mode expansion, sextic force field, excitation order, sparse matrix
Ngā upoko tukutuku/Māori subject headings
ANZSRC fields of research
Field of Research::03 - Chemical Sciences
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