Peeling phylogenetic 'oranges'

Type of content
Discussion / Working Papers
Publisher's DOI/URI
Thesis discipline
Degree name
Publisher
University of Canterbury
Journal Title
Journal ISSN
Volume Title
Language
Date
2003
Authors
Moulton, Vincent
Steel, M.
Abstract

We investigate the combinatorics of a topological space that is generated by the set of edge-weighted finite trees. This space arises by multiplying the weights of edges on paths in trees and is closely connected to tree reconstruction problems involving finite state Markov processes. We show that this space is a contractible finite CW-complex whose face poset can be described via a partial order on semilabelled forests. We then describe some combinatorial properties of this poset, showing that, for example, it is pure, thin and contractible.

Description
Citation
Keywords
trees, forests, partitions, poset, contractibility
Ngā upoko tukutuku/Māori subject headings
ANZSRC fields of research
Field of Research::01 - Mathematical Sciences::0102 - Applied Mathematics
Rights
All Rights Reserved